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Yoco (Online Gateway) vs Paystack

South Africa merchant fee comparison covering card rates, Instant EFT, payout speed, monthly platform fees, and typical store platforms.

Cheapest match at R50 000 / month (R1000 AOV, cards): Yoco (Online Gateway)
FeatureYoco (Online Gateway)Paystack
Card rate2.95% excl. VAT2.9% + R1 excl. VAT
Instant EFTNot listed2% excl. VAT
Payout feeR0.00R0.00
Payout speed1-2 business days2 working days
Monthly feeR0R0
Est. monthly cost*R 1 696,25R 1 725,00
PlatformsWooCommerce, Shopify, WixWooCommerce, Shopify, Custom API, Wix
Best forMerchants selling both in person and online.SaaS, developer-first apps, and recurring billing.

*Estimated card fees at R50 000 monthly volume and R1000 average order, including payout, monthly fees, and VAT where the provider excludes it. Rates checked 29 October 2026. Run your own numbers.

Apply with Yoco (Online Gateway)

Merchants selling both in person and online.

Apply with Paystack

SaaS, developer-first apps, and recurring billing.

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